![]() Access to local services, including Blast, Clustalw, EMBOSS.Access to online services and database, including NCBI services (Blast, Entrez, PubMed) and ExPASY services (SwissProt, Prosite).BioSQL − Standard set of SQL tables for storing sequences plus features and annotations.Supports FASTA, PDB, GenBank, Blast, SCOP, PubMed/Medline, ExPASy-related formats.Interpreted, interactive and object oriented.Some of the salient features are listed below − Featuresīiopython is portable, clear and has easy to learn syntax. It has sibling projects like BioPerl, BioJava and BioRuby. It provides lot of parsers to read all major genetic databases like GenBank, SwissPort, FASTA, etc., as well as wrappers/interfaces to run other popular bioinformatics software/tools like NCBI BLASTN, Entrez, etc., inside the python environment. It runs on Windows, Linux, Mac OS X, etc.īasically, Biopython is a collection of python modules that provide functions to deal with DNA, RNA & protein sequence operations such as reverse complementing of a DNA string, finding motifs in protein sequences, etc. It also contains C code to optimize the complex computation part of the software. It is developed by Chapman and Chang, mainly written in Python. It contains a number of different sub-modules for common bioinformatics tasks. Biopython is the largest and most popular bioinformatics package for Python. ![]()
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